DATA INTERPRETATION SERVICES
Access and Training to use MetaCore for biological data interpretation:
Pathway enrichment
GO Ontology Enrichment
Network Analysis
If you have a list of genes which have changed in your experiment and are wondering which pathways and functions those genes are involved in, MetaCore can help you find an answer. MetaCore’s manually curated database is based on publications and kept up to date by the provider. It can even be searched for keywords without data of your own and provide you with a list of molecules and publications that are relevant to your research.
Single-Cell Cluster Analysis and Annotation Assistance
With access to Partek Flow’s single-cell browser, we can assist you in visualizing expressed cell type markers in your single cell data to help you browse through your data and identify the cell type of your clusters.
Data Presentation, e.g.
PCA Plots
Heatmaps
Volcano Plots
Dot Plots
INSTRUMENT ACCESS
Equipment can be reserved using the online scheduling system. Simply contact Sabine Waigel for access.
Real-Time PCR (QuantStudio 7)
Covaris Sonicator S220
Miltenyi GentleMacs Octo Tissue Dissociator
Agilent Bioanalyzer
Nanodrop
Qubit
WORKSHOPS
RNA/DNA QC
Wet-lab NGS Library Preparation
Sequencing Run Set‐Up
Student Summer Workshops
Genomics data analysis tools workshops – Genome Browser, MetaCore, etc
MINING OF PUBLICLY AVAILABLE DATA SETS
Reach out to us for more information if you would like to mine publicly available datasets while we are incorporating these services.
